|The COSNet R package
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The COSNet package has no dependencies. Nevertheless, the experiments reported in the package vignette use the R packages bionetdata and PerfMeas, available at the CRAN repository, for loading benchmark data and compute various measure of performance respectively.
The package PerfMeas in turn depends on the Bioconductor R packages limma, graph, and RBGL, which can be installed as described for the COSNet package.
To install the bionetdata package, type
or follow the instruction for the manual installation above.